PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn233451
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family G2-like
Protein Properties Length: 403aa    MW: 44989.7 Da    PI: 7.7128
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn233451genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.41.4e-32257312156
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                 k+r++W+peLH+rFv+a++qLGGs+ AtPk+i++lm+v+gLt+++vkSHLQkYRl+
  Achn233451 257 KQRRCWSPELHRRFVNALQQLGGSQAATPKQIRDLMQVDGLTNDEVKSHLQKYRLH 312
                 79****************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.207254314IPR017930Myb domain
SuperFamilySSF466891.34E-17255315IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-29255315IPR009057Homeodomain-like
TIGRFAMsTIGR015579.0E-27257312IPR006447Myb domain, plants
PfamPF002491.2E-7259310IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    Send to blast
MGSIPHELRL DVRPTFIPKT ISEFLGELTE IGSASEKLMR LNDFVKRLED EMRKIDAFKR  60
ELPLCMILLN DAIVTLKEES TECRARNVEP VLEKFIPLKK NCSEDEESGV KEEKDRDKMN  120
WMRSVQLWNN NDCKNIGSKH NQKQNSVPQF MQGVREDCPL VNDGPFECNK NKTGSKTFTP  180
FKVCSIFPAT TMRKEDKMEI PGLSLLTPGT NNLREEVGSN GLSSKISGSI AESSTTTTNY  240
SNLRARPQTQ QQQNARKQRR CWSPELHRRF VNALQQLGGS QAATPKQIRD LMQVDGLTND  300
EVKSHLQKYR LHTRRLPNAT GTPANQPLVL SGGLWMPQDQ NGESSKQSSS QSGSPQGPFH  360
LAGTGGGTST TGGESMEEED DEAKSESYCW KSHIPMSGKV DV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002284970.21e-160PREDICTED: uncharacterized protein LOC100267475 isoform X2
TrEMBLA5BS051e-162A5BS05_VITVI; Putative uncharacterized protein
STRINGVIT_03s0063g01060.t011e-159(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43612443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.12e-54G2-like family protein